Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ddx56Q9D0R4 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm15018-201ENSMUST00000117090 633 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm11905-201ENSMUST00000117653 678 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm35323-201ENSMUST00000191836 499 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm44665-201ENSMUST00000205381 251 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm6230-201ENSMUST00000208077 780 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm18781-201ENSMUST00000211252 924 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm21089-201ENSMUST00000215843 325 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm46203-201ENSMUST00000218130 478 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.11□□□□□ -1.27
Ddx56Q9D0R4 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm42598-201ENSMUST00000200110 2437 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm12447-201ENSMUST00000119110 470 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm11517-201ENSMUST00000119491 387 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Gm13222-201ENSMUST00000119638 138 ntBASIC7.1□□□□□ -1.27
Ddx56Q9D0R4 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms