Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh4Q99MT2 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Msh4Q99MT2 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Msh4Q99MT2 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm23748-201ENSMUST00000104227 131 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm12135-201ENSMUST00000119170 466 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm13222-201ENSMUST00000119638 138 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm14300-201ENSMUST00000120800 946 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm14369-201ENSMUST00000121355 285 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm23441-201ENSMUST00000157268 127 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm7281-201ENSMUST00000160010 543 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm5871-201ENSMUST00000176461 718 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm38068-201ENSMUST00000192546 540 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm43689-201ENSMUST00000195951 427 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm7351-201ENSMUST00000210745 580 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Msh4Q99MT2 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.36□□□□□ -1.39
Msh4Q99MT2 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm12939-201ENSMUST00000117303 165 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm14613-201ENSMUST00000122239 752 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm28011-201ENSMUST00000184097 175 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Msh4Q99MT2 Gm45122-201ENSMUST00000206376 784 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms