Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc28aQ8CEI3 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.59□□□□□ -1.36
Ccdc28aQ8CEI3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.59□□□□□ -1.36
Ccdc28aQ8CEI3 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Rnu11-201ENSMUST00000104135 134 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm2178-201ENSMUST00000104927 357 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm11920-201ENSMUST00000118491 563 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm25550-201ENSMUST00000158079 128 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm25435-201ENSMUST00000158277 267 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm27005-201ENSMUST00000182783 921 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Mir7029-201ENSMUST00000184777 61 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43546-201ENSMUST00000196721 943 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43561-201ENSMUST00000199866 448 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm42713-201ENSMUST00000202709 945 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm45136-201ENSMUST00000205793 943 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm18586-201ENSMUST00000217265 518 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm18040-201ENSMUST00000217922 827 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm19056-201ENSMUST00000218220 797 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.58□□□□□ -1.36
Ccdc28aQ8CEI3 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm12842-201ENSMUST00000117298 476 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm5166-201ENSMUST00000121332 573 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Mir5100-201ENSMUST00000174993 64 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm5575-201ENSMUST00000190879 398 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm37838-201ENSMUST00000194464 312 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm43664-201ENSMUST00000196038 734 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm7832-201ENSMUST00000202613 880 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm9367-201ENSMUST00000205703 546 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm44837-201ENSMUST00000206863 717 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm45156-201ENSMUST00000207255 439 ntBASIC6.57□□□□□ -1.36
Ccdc28aQ8CEI3 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms