Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15252-201ENSMUST00000177750 883 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm15256-201ENSMUST00000177793 883 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm15260-201ENSMUST00000179402 883 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Usp47Q8BY87 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.93□□□□□ -0.98
Usp47Q8BY87 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm22300-201ENSMUST00000082661 126 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm44068-201ENSMUST00000204049 2128 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm25795-201ENSMUST00000104421 132 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm13818-201ENSMUST00000119441 511 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm26169-201ENSMUST00000158420 135 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm28080-201ENSMUST00000188552 722 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm8241-201ENSMUST00000189286 816 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm21524-201ENSMUST00000190499 696 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm21715-201ENSMUST00000191056 694 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm18405-201ENSMUST00000220743 511 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm3800-201ENSMUST00000221086 554 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm9293-201ENSMUST00000223096 306 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 AC166105.1-201ENSMUST00000227512 482 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp47Q8BY87 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm11624-201ENSMUST00000118579 1041 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm22132-201ENSMUST00000175316 100 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm8009-201ENSMUST00000191672 436 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm37475-201ENSMUST00000193107 1015 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm19653-201ENSMUST00000204326 1039 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm18863-201ENSMUST00000217004 1299 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm4803-201ENSMUST00000218729 1279 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm37730-201ENSMUST00000192432 2211 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm37593-201ENSMUST00000191669 3254 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm38077-201ENSMUST00000193657 3245 ntBASIC8.91□□□□□ -0.98
Usp47Q8BY87 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp47Q8BY87 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms