Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm14417-201ENSMUST00000120036 1074 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm12978-201ENSMUST00000121250 522 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm15096-201ENSMUST00000121918 878 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm6182-201ENSMUST00000156439 1208 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm23450-201ENSMUST00000178285 91 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm5947-201ENSMUST00000179156 714 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm5645-201ENSMUST00000179597 714 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm30708-201ENSMUST00000202183 312 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 AC154481.1-201ENSMUST00000223532 331 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 CT030254.1-201ENSMUST00000225450 1078 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 AC122459.2-201ENSMUST00000227099 638 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm25133-201ENSMUST00000082647 130 ntBASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usp40Q8BWR4 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usp40Q8BWR4 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.9□□□□□ -0.99
Usp40Q8BWR4 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.9□□□□□ -0.99
Usp40Q8BWR4 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usp40Q8BWR4 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usp40Q8BWR4 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm11834-201ENSMUST00000122257 585 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm29160-201ENSMUST00000190094 699 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm7626-201ENSMUST00000195801 353 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm44360-201ENSMUST00000200081 82 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm43501-201ENSMUST00000202513 107 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm33312-201ENSMUST00000222443 332 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 AC105950.1-201ENSMUST00000222637 408 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm18026-201ENSMUST00000222789 727 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Gm38142-201ENSMUST00000194093 3555 ntBASIC8.89□□□□□ -0.99
Usp40Q8BWR4 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp40Q8BWR4 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm22371-201ENSMUST00000104588 130 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm15161-201ENSMUST00000117340 387 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm15366-201ENSMUST00000118433 1019 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm6047-201ENSMUST00000167221 574 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm15257-201ENSMUST00000177680 883 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm15252-201ENSMUST00000177750 883 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm15256-201ENSMUST00000177793 883 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 236.2 ms