Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp54Q8BL06 AC122305.1-201ENSMUST00000214803 3921 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm43900-201ENSMUST00000204868 2669 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm13811-201ENSMUST00000117800 256 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm3943-201ENSMUST00000118606 718 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm22106-201ENSMUST00000122544 127 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Mir6337-201ENSMUST00000184194 105 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm43054-201ENSMUST00000199495 884 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm43946-201ENSMUST00000204058 886 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Gm19900-201ENSMUST00000207285 576 ntBASIC8.95□□□□□ -0.98
Usp54Q8BL06 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Usp54Q8BL06 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm29438-201ENSMUST00000191298 2613 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 AC156025.2-201ENSMUST00000225907 1533 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm14335-201ENSMUST00000119165 810 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm6808-201ENSMUST00000162341 807 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm37511-201ENSMUST00000192901 294 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm5110-201ENSMUST00000203122 1063 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 AC123832.2-201ENSMUST00000215151 129 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 AC108846.4-201ENSMUST00000216783 341 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm18413-201ENSMUST00000221573 655 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp54Q8BL06 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC8.94□□□□□ -0.98
Usp54Q8BL06 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 CT009480.2-201ENSMUST00000225152 3369 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm19125-201ENSMUST00000188408 1383 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm14115-201ENSMUST00000119242 482 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm13531-201ENSMUST00000121893 543 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm25439-201ENSMUST00000158280 131 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm19231-201ENSMUST00000193212 830 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Igkv3-8-201ENSMUST00000197635 339 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 AC102287.1-201ENSMUST00000211412 454 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 AC122332.1-201ENSMUST00000214384 285 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm28392-201ENSMUST00000077630 393 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Gm24525-201ENSMUST00000082917 151 ntBASIC8.93□□□□□ -0.98
Usp54Q8BL06 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp54Q8BL06 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms