Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Scaf4Q6PFF0 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Scaf4Q6PFF0 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Scaf4Q6PFF0 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Scaf4Q6PFF0 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.32
Scaf4Q6PFF0 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Mir678-201ENSMUST00000102114 84 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Mir697-201ENSMUST00000102316 109 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm24768-201ENSMUST00000158512 94 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm4373-201ENSMUST00000178571 556 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm7481-201ENSMUST00000182020 995 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm21742-201ENSMUST00000189352 548 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm20885-201ENSMUST00000190192 654 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm38231-201ENSMUST00000192030 347 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm29740-201ENSMUST00000193182 655 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm36866-201ENSMUST00000193343 657 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm36047-201ENSMUST00000193659 657 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm20857-201ENSMUST00000194766 657 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm20858-201ENSMUST00000195459 657 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm37908-201ENSMUST00000195828 470 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm43590-201ENSMUST00000195987 387 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm19596-201ENSMUST00000203685 739 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Gm7731-201ENSMUST00000091759 470 ntBASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Scaf4Q6PFF0 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Mir763-201ENSMUST00000103249 120 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm14358-201ENSMUST00000118458 403 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm11987-201ENSMUST00000118524 381 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm14727-201ENSMUST00000118526 525 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm15007-201ENSMUST00000119982 710 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm14721-201ENSMUST00000121381 525 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm16458-201ENSMUST00000121428 502 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm23467-201ENSMUST00000157127 159 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm23385-201ENSMUST00000158592 295 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm17217-201ENSMUST00000166613 469 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm7991-201ENSMUST00000168668 591 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm4956-202ENSMUST00000178869 672 ntBASIC6.82□□□□□ -1.32
Scaf4Q6PFF0 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms