Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm21524-201ENSMUST00000190499 696 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm21715-201ENSMUST00000191056 694 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm28121-201ENSMUST00000191420 339 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Trbv28-201ENSMUST00000192804 264 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm43431-201ENSMUST00000198577 340 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm43841-201ENSMUST00000199491 586 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm2975-201ENSMUST00000209710 820 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 AL935138.1-201ENSMUST00000215309 196 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm4042-201ENSMUST00000216946 637 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Dgkh-204ENSMUST00000227767 3319 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm13196-201ENSMUST00000118297 379 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm11443-201ENSMUST00000118790 479 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm14869-201ENSMUST00000119007 884 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm12540-201ENSMUST00000121938 319 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm24393-201ENSMUST00000158135 97 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Mir7653-201ENSMUST00000184358 61 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm8896-201ENSMUST00000197434 1106 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm42760-201ENSMUST00000199814 311 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm43571-201ENSMUST00000200067 3098 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.12□□□□□ -1.43
Col8a1Q00780 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.12□□□□□ -1.43
Col8a1Q00780 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms