Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim43cP86449 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm7680-201ENSMUST00000216198 1348 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm13754-201ENSMUST00000120486 998 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm14353-201ENSMUST00000122200 869 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm25556-201ENSMUST00000158077 144 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm20691-201ENSMUST00000176889 333 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm27507-201ENSMUST00000184199 93 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm18382-201ENSMUST00000194394 582 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm43546-201ENSMUST00000196721 943 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm8182-201ENSMUST00000197863 769 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm42713-201ENSMUST00000202709 945 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm3549-201ENSMUST00000203873 794 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm19065-202ENSMUST00000203910 1165 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm45136-201ENSMUST00000205793 943 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim43cP86449 AC154419.1-201ENSMUST00000227627 272 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim43cP86449 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim43cP86449 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim43cP86449 Mir296-201ENSMUST00000083587 79 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43cP86449 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.39□□□□□ -1.23
Trim43cP86449 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43cP86449 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Trim43cP86449 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43cP86449 AU020206-202ENSMUST00000206358 3009 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm13739-201ENSMUST00000118020 530 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm5754-201ENSMUST00000118774 892 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm15057-201ENSMUST00000121516 534 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm11581-201ENSMUST00000122024 763 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm26321-201ENSMUST00000157740 242 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm44370-201ENSMUST00000175436 112 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim43cP86449 Gm28117-201ENSMUST00000188472 371 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm38214-201ENSMUST00000192581 988 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.38□□□□□ -1.23
Trim43cP86449 Gm37993-201ENSMUST00000195301 988 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms