Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm12520-201ENSMUST00000117493 316 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm11260-201ENSMUST00000121163 942 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm22390-201ENSMUST00000157588 325 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm25898-201ENSMUST00000158303 106 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm27542-201ENSMUST00000184184 256 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Mir7029-201ENSMUST00000184777 61 ntBASIC6.7□□□□□ -1.34
SgcbP82349 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.7□□□□□ -1.34
SgcbP82349 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm44356-201ENSMUST00000196731 111 ntBASIC6.7□□□□□ -1.34
SgcbP82349 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gm43558-201ENSMUST00000200155 210 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gm18765-201ENSMUST00000203166 660 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm44726-201ENSMUST00000203427 217 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm20997-201ENSMUST00000205148 231 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.7□□□□□ -1.34
SgcbP82349 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm45506-201ENSMUST00000211620 280 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC153852.1-201ENSMUST00000217881 567 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC079644.1-201ENSMUST00000220586 405 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC158521.1-201ENSMUST00000225295 660 ntBASIC6.7□□□□□ -1.34
SgcbP82349 AC164883.2-201ENSMUST00000227931 3815 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 mt-Tr-201ENSMUST00000082412 68 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC6.7□□□□□ -1.34
SgcbP82349 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SgcbP82349 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SgcbP82349 Dgkh-206ENSMUST00000228362 3308 ntBASIC6.7□□□□□ -1.34
SgcbP82349 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
SgcbP82349 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
SgcbP82349 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.69□□□□□ -1.34
SgcbP82349 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SgcbP82349 Gm38331-201ENSMUST00000195719 2671 ntBASIC6.69□□□□□ -1.34
SgcbP82349 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Gm23692-201ENSMUST00000101881 160 ntBASIC6.69□□□□□ -1.34
SgcbP82349 Mir688-201ENSMUST00000102055 75 ntBASIC6.69□□□□□ -1.34
SgcbP82349 Gm24986-201ENSMUST00000104452 132 ntBASIC6.69□□□□□ -1.34
SgcbP82349 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SgcbP82349 Gm13521-201ENSMUST00000118922 866 ntBASIC6.69□□□□□ -1.34
SgcbP82349 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.69□□□□□ -1.34
SgcbP82349 Gm13221-201ENSMUST00000121712 430 ntBASIC6.69□□□□□ -1.34
SgcbP82349 Gm12045-201ENSMUST00000122122 573 ntBASIC6.69□□□□□ -1.34
SgcbP82349 Gm23212-201ENSMUST00000122718 60 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms