Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm5321-201ENSMUST00000072050 447 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdh11P55288 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdh11P55288 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 AU020206-202ENSMUST00000206358 3009 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.88□□□□□ -1.47
Cdh11P55288 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Cdh11P55288 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Cdh11P55288 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm24473-201ENSMUST00000104483 131 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm22710-201ENSMUST00000116892 125 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm7494-201ENSMUST00000121248 441 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm29650-201ENSMUST00000188485 742 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm7804-202ENSMUST00000194187 854 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm20128-201ENSMUST00000196189 417 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm19088-201ENSMUST00000198800 566 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm44225-201ENSMUST00000203582 186 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdh11P55288 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdh11P55288 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Cdh11P55288 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Cdh11P55288 AW822073-201ENSMUST00000075305 555 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdh11P55288 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Cdh11P55288 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.87□□□□□ -1.47
Cdh11P55288 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Cdh11P55288 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdh11P55288 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdh11P55288 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdh11P55288 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.86□□□□□ -1.47
Cdh11P55288 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdh11P55288 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms