Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm43044-201ENSMUST00000198091 379 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm42452-201ENSMUST00000199749 617 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm44265-201ENSMUST00000203631 465 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm44232-201ENSMUST00000204537 225 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm7443-201ENSMUST00000206355 378 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm18586-201ENSMUST00000217265 518 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm7413-201ENSMUST00000219498 462 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm7986-201ENSMUST00000221336 551 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Shmt1P50431 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Shmt1P50431 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Shmt1P50431 Mir466f-2-201ENSMUST00000104805 94 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm14513-201ENSMUST00000117403 123 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gm11504-201ENSMUST00000120211 173 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm14796-201ENSMUST00000121216 959 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gm14587-201ENSMUST00000121714 658 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gm23426-201ENSMUST00000122483 318 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm22820-201ENSMUST00000157205 329 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm26595-201ENSMUST00000181585 484 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gm37932-201ENSMUST00000192258 1167 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gm2691-201ENSMUST00000203205 901 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 AC158392.1-201ENSMUST00000223720 1069 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 AC133517.2-201ENSMUST00000226820 690 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 AC164302.1-201ENSMUST00000227036 433 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Olfr1153-201ENSMUST00000052300 957 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Shmt1P50431 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.01□□□□□ -1.29
Shmt1P50431 Cmah-208ENSMUST00000224819 9482 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.01□□□□□ -1.29
Shmt1P50431 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.01□□□□□ -1.29
Shmt1P50431 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Shmt1P50431 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Shmt1P50431 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Shmt1P50431 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7□□□□□ -1.29
Shmt1P50431 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Shmt1P50431 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7□□□□□ -1.29
Shmt1P50431 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Gm3883-201ENSMUST00000098119 3229 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm25414-201ENSMUST00000101814 107 ntBASIC7□□□□□ -1.29
Shmt1P50431 Mir669o-201ENSMUST00000103898 96 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm6620-201ENSMUST00000120113 715 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm14713-201ENSMUST00000122362 686 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm26023-201ENSMUST00000122722 313 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm23207-201ENSMUST00000158665 102 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm20491-201ENSMUST00000173765 1241 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm26381-201ENSMUST00000174895 92 ntBASIC7□□□□□ -1.29
Shmt1P50431 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC7□□□□□ -1.29
Shmt1P50431 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC7□□□□□ -1.29
Shmt1P50431 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm36994-201ENSMUST00000192941 492 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm2229-201ENSMUST00000193328 710 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms