Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25916-201ENSMUST00000104263 131 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm22103-201ENSMUST00000116733 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm26475-201ENSMUST00000116769 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm23620-201ENSMUST00000116812 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25042-201ENSMUST00000116856 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25540-201ENSMUST00000116880 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm15016-201ENSMUST00000117300 720 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm15901-201ENSMUST00000117663 941 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm23884-201ENSMUST00000122687 294 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm6081-201ENSMUST00000134472 489 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm26167-201ENSMUST00000158423 253 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25487-201ENSMUST00000158725 125 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25675-201ENSMUST00000174979 118 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm23550-201ENSMUST00000179003 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25123-201ENSMUST00000179154 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25353-201ENSMUST00000179366 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm22992-201ENSMUST00000179496 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm25892-201ENSMUST00000179867 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm24092-201ENSMUST00000180257 121 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm2229-201ENSMUST00000193328 710 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm9504-201ENSMUST00000196322 468 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm44361-201ENSMUST00000197960 94 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.05□□□□□ -1.44
Tnfsf4P43488 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tnfsf4P43488 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm14382-201ENSMUST00000117374 437 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm6987-201ENSMUST00000119319 428 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm7599-201ENSMUST00000121453 796 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm22604-201ENSMUST00000157604 311 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm7289-201ENSMUST00000168993 734 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm26509-201ENSMUST00000180947 948 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm27853-201ENSMUST00000184176 250 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm17824-201ENSMUST00000197690 805 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm3549-201ENSMUST00000203873 794 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm44896-201ENSMUST00000206190 772 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm46364-201ENSMUST00000218548 319 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm5928-201ENSMUST00000221839 466 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm19340-201ENSMUST00000221995 345 ntBASIC6.04□□□□□ -1.44
Tnfsf4P43488 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tnfsf4P43488 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms