Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.23□□□□□ -1.57
VhlP40338 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VhlP40338 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VhlP40338 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VhlP40338 CT030185.2-201ENSMUST00000222614 1310 ntBASIC5.23□□□□□ -1.57
VhlP40338 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
VhlP40338 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.22□□□□□ -1.57
VhlP40338 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VhlP40338 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.22□□□□□ -1.57
VhlP40338 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.22□□□□□ -1.57
VhlP40338 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VhlP40338 Gm24888-201ENSMUST00000104387 130 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm25344-201ENSMUST00000104503 132 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm25564-201ENSMUST00000104604 132 ntBASIC5.22□□□□□ -1.57
VhlP40338 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VhlP40338 Gm12104-201ENSMUST00000120359 979 ntBASIC5.22□□□□□ -1.57
VhlP40338 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm14515-201ENSMUST00000121327 216 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm23077-201ENSMUST00000157854 116 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm16113-201ENSMUST00000159629 372 ntBASIC5.22□□□□□ -1.57
VhlP40338 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC5.22□□□□□ -1.57
VhlP40338 Gm23018-201ENSMUST00000177928 109 ntBASIC5.22□□□□□ -1.57
VhlP40338 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm6681-201ENSMUST00000205215 607 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm45042-201ENSMUST00000207377 211 ntBASIC5.22□□□□□ -1.57
VhlP40338 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.22□□□□□ -1.57
VhlP40338 CT009711.2-202ENSMUST00000224538 973 ntBASIC5.22□□□□□ -1.57
VhlP40338 AC154515.3-201ENSMUST00000225081 1159 ntBASIC5.22□□□□□ -1.57
VhlP40338 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 n-R5s169-201ENSMUST00000083110 120 ntBASIC5.22□□□□□ -1.57
VhlP40338 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.22□□□□□ -1.57
VhlP40338 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VhlP40338 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.22□□□□□ -1.57
VhlP40338 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VhlP40338 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.21□□□□□ -1.57
VhlP40338 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.21□□□□□ -1.57
VhlP40338 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VhlP40338 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VhlP40338 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
VhlP40338 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
VhlP40338 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VhlP40338 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.21□□□□□ -1.58
VhlP40338 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VhlP40338 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VhlP40338 Gm22781-201ENSMUST00000104083 137 ntBASIC5.21□□□□□ -1.58
VhlP40338 Snord88a-201ENSMUST00000116723 90 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm14382-201ENSMUST00000117374 437 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm11889-201ENSMUST00000118402 1079 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm13444-201ENSMUST00000119445 522 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm14728-201ENSMUST00000122196 492 ntBASIC5.21□□□□□ -1.58
VhlP40338 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC5.21□□□□□ -1.58
VhlP40338 Gm26167-201ENSMUST00000158423 253 ntBASIC5.21□□□□□ -1.58
VhlP40338 Mir6987-201ENSMUST00000184789 73 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.21□□□□□ -1.58
VhlP40338 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.21□□□□□ -1.58
VhlP40338 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm43396-201ENSMUST00000197506 706 ntBASIC5.21□□□□□ -1.58
VhlP40338 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC5.21□□□□□ -1.58
VhlP40338 Gm43243-201ENSMUST00000199964 278 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm32158-201ENSMUST00000200135 404 ntBASIC5.21□□□□□ -1.58
VhlP40338 Gm44265-201ENSMUST00000203631 465 ntBASIC5.21□□□□□ -1.58
VhlP40338 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
VhlP40338 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC5.21□□□□□ -1.58
VhlP40338 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC5.21□□□□□ -1.58
VhlP40338 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.21□□□□□ -1.58
VhlP40338 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VhlP40338 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.21□□□□□ -1.58
VhlP40338 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.21□□□□□ -1.58
VhlP40338 AC115304.1-202ENSMUST00000226850 837 ntBASIC5.21□□□□□ -1.58
VhlP40338 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VhlP40338 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VhlP40338 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VhlP40338 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VhlP40338 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VhlP40338 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms