Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm6181-201ENSMUST00000117187 264 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm13930-201ENSMUST00000118569 368 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm3943-201ENSMUST00000118606 718 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm2058-201ENSMUST00000178791 560 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm27355-201ENSMUST00000185045 128 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm18728-201ENSMUST00000186155 753 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm18781-201ENSMUST00000211252 924 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm45739-201ENSMUST00000213094 388 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm6477-201ENSMUST00000217098 764 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm10095-201ENSMUST00000222765 483 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.64□□□□□ -1.35
Cxcl12P40224 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cxcl12P40224 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cxcl12P40224 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm12303-201ENSMUST00000119506 673 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm25152-201ENSMUST00000157117 114 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.63□□□□□ -1.35
Cxcl12P40224 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm37493-201ENSMUST00000193167 433 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm42799-201ENSMUST00000201331 328 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm44768-201ENSMUST00000205719 393 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm16335-201ENSMUST00000077495 309 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.63□□□□□ -1.35
Cxcl12P40224 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cxcl12P40224 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cxcl12P40224 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cxcl12P40224 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms