Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Traf1P39428 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Gm13642-201ENSMUST00000121697 381 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Gm12152-201ENSMUST00000122465 684 ntBASIC7.55□□□□□ -1.2
Traf1P39428 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.55□□□□□ -1.2
Traf1P39428 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.55□□□□□ -1.2
Traf1P39428 Gm23903-201ENSMUST00000157566 131 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 Gm37177-201ENSMUST00000193768 417 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Gm7492-201ENSMUST00000201745 725 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Gm44538-201ENSMUST00000205615 348 ntBASIC7.55□□□□□ -1.2
Traf1P39428 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.55□□□□□ -1.2
Traf1P39428 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.55□□□□□ -1.2
Traf1P39428 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Traf1P39428 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Traf1P39428 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Traf1P39428 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Traf1P39428 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Gm24069-201ENSMUST00000104512 127 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm11271-201ENSMUST00000116054 440 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm14375-201ENSMUST00000119490 855 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm12630-201ENSMUST00000121575 784 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm23430-201ENSMUST00000122490 314 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm23884-201ENSMUST00000122687 294 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm5244-202ENSMUST00000189517 743 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm9517-201ENSMUST00000195021 874 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Gm5853-201ENSMUST00000197183 632 ntBASIC7.54□□□□□ -1.2
Traf1P39428 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.54□□□□□ -1.2
Traf1P39428 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm26442-201ENSMUST00000082588 153 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Traf1P39428 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Traf1P39428 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.54□□□□□ -1.2
Traf1P39428 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Traf1P39428 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Traf1P39428 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Traf1P39428 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.53□□□□□ -1.2
Traf1P39428 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Traf1P39428 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Traf1P39428 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Traf1P39428 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Traf1P39428 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.53□□□□□ -1.2
Traf1P39428 Gm14550-201ENSMUST00000117918 407 ntBASIC7.53□□□□□ -1.2
Traf1P39428 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.53□□□□□ -1.2
Traf1P39428 Gm6977-201ENSMUST00000121568 512 ntBASIC7.53□□□□□ -1.2
Traf1P39428 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.53□□□□□ -1.2
Traf1P39428 Gm5125-201ENSMUST00000148614 624 ntBASIC7.53□□□□□ -1.2
Traf1P39428 Gm22820-201ENSMUST00000157205 329 ntBASIC7.53□□□□□ -1.2
Traf1P39428 Gm23071-201ENSMUST00000158242 115 ntBASIC7.53□□□□□ -1.2
Traf1P39428 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Traf1P39428 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms