Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm7113-201ENSMUST00000120477 958 ntBASIC5.68□□□□□ -1.5
P20040 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
P20040 Gm21990-201ENSMUST00000124692 383 ntBASIC5.68□□□□□ -1.5
P20040 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.68□□□□□ -1.5
P20040 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.68□□□□□ -1.5
P20040 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.68□□□□□ -1.5
P20040 Gm25435-201ENSMUST00000158277 267 ntBASIC5.68□□□□□ -1.5
P20040 Gm24682-201ENSMUST00000158764 137 ntBASIC5.68□□□□□ -1.5
P20040 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.68□□□□□ -1.5
P20040 Gm20454-201ENSMUST00000172713 221 ntBASIC5.68□□□□□ -1.5
P20040 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm27299-201ENSMUST00000184593 103 ntBASIC5.68□□□□□ -1.5
P20040 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC5.68□□□□□ -1.5
P20040 Gm28620-201ENSMUST00000190463 439 ntBASIC5.68□□□□□ -1.5
P20040 Gm7452-201ENSMUST00000200764 788 ntBASIC5.68□□□□□ -1.5
P20040 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.68□□□□□ -1.5
P20040 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.68□□□□□ -1.5
P20040 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.68□□□□□ -1.5
P20040 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.68□□□□□ -1.5
P20040 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.68□□□□□ -1.5
P20040 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.68□□□□□ -1.5
P20040 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
P20040 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
P20040 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.68□□□□□ -1.5
P20040 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
P20040 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
P20040 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
P20040 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
P20040 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.68□□□□□ -1.5
P20040 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.68□□□□□ -1.5
P20040 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.67□□□□□ -1.5
P20040 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.67□□□□□ -1.5
P20040 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
P20040 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.67□□□□□ -1.5
P20040 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.67□□□□□ -1.5
P20040 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
P20040 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
P20040 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Gm13983-201ENSMUST00000118018 865 ntBASIC5.67□□□□□ -1.5
P20040 Gm14614-201ENSMUST00000119873 384 ntBASIC5.67□□□□□ -1.5
P20040 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Gm16298-201ENSMUST00000161107 420 ntBASIC5.67□□□□□ -1.5
P20040 Gm5456-201ENSMUST00000170706 844 ntBASIC5.67□□□□□ -1.5
P20040 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.67□□□□□ -1.5
P20040 Gm17045-201ENSMUST00000178600 844 ntBASIC5.67□□□□□ -1.5
P20040 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.67□□□□□ -1.5
P20040 Gm27970-201ENSMUST00000184854 407 ntBASIC5.67□□□□□ -1.5
P20040 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.67□□□□□ -1.5
P20040 Gm29605-201ENSMUST00000190800 292 ntBASIC5.67□□□□□ -1.5
P20040 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.67□□□□□ -1.5
P20040 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.67□□□□□ -1.5
P20040 Gm43849-201ENSMUST00000201086 215 ntBASIC5.67□□□□□ -1.5
P20040 Gm43928-201ENSMUST00000203737 409 ntBASIC5.67□□□□□ -1.5
P20040 Gm17918-201ENSMUST00000205315 574 ntBASIC5.67□□□□□ -1.5
P20040 Gm7351-201ENSMUST00000210745 580 ntBASIC5.67□□□□□ -1.5
P20040 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
P20040 Gm8290-201ENSMUST00000218202 477 ntBASIC5.67□□□□□ -1.5
P20040 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.67□□□□□ -1.5
P20040 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.67□□□□□ -1.5
P20040 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
P20040 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.67□□□□□ -1.5
P20040 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.67□□□□□ -1.5
P20040 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.67□□□□□ -1.5
P20040 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.67□□□□□ -1.5
P20040 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.67□□□□□ -1.5
P20040 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.67□□□□□ -1.5
P20040 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.67□□□□□ -1.5
P20040 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
P20040 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms