Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm42734-201ENSMUST00000201656 878 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.41□□□□□ -1.38
Lire1P11260 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.41□□□□□ -1.38
Lire1P11260 AV026068-229ENSMUST00000225516 595 ntBASIC6.41□□□□□ -1.38
Lire1P11260 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.41□□□□□ -1.38
Lire1P11260 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Lire1P11260 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Lire1P11260 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Lire1P11260 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Lire1P11260 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Mir678-201ENSMUST00000102114 84 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm22671-201ENSMUST00000104420 134 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm12713-201ENSMUST00000118404 764 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm13545-201ENSMUST00000119044 482 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm5843-201ENSMUST00000121631 476 ntBASIC6.4□□□□□ -1.38
Lire1P11260 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.4□□□□□ -1.38
Lire1P11260 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm5611-201ENSMUST00000164523 852 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Lire1P11260 Gm25640-201ENSMUST00000175378 125 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Mir7084-201ENSMUST00000183876 70 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Mir6241-201ENSMUST00000184225 103 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm27156-201ENSMUST00000184589 754 ntBASIC6.4□□□□□ -1.38
Lire1P11260 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.4□□□□□ -1.38
Lire1P11260 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm44984-201ENSMUST00000207802 394 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.4□□□□□ -1.38
Lire1P11260 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.4□□□□□ -1.38
Lire1P11260 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.4□□□□□ -1.38
Lire1P11260 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.4□□□□□ -1.38
Lire1P11260 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.4□□□□□ -1.38
Lire1P11260 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.4□□□□□ -1.38
Lire1P11260 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.4□□□□□ -1.38
Lire1P11260 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Lire1P11260 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Lire1P11260 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Lire1P11260 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.4□□□□□ -1.38
Lire1P11260 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Lire1P11260 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Lire1P11260 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Lire1P11260 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.4□□□□□ -1.39
Lire1P11260 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.4□□□□□ -1.39
Lire1P11260 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Lire1P11260 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Lire1P11260 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Lire1P11260 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Lire1P11260 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lire1P11260 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lire1P11260 Snord65-201ENSMUST00000104269 72 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lire1P11260 Gm11972-201ENSMUST00000118514 389 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Gm22795-201ENSMUST00000157233 118 ntBASIC6.39□□□□□ -1.39
Lire1P11260 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms