Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.43□□□□□ -1.38
CopeO89079 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.43□□□□□ -1.38
CopeO89079 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.43□□□□□ -1.38
CopeO89079 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm2178-201ENSMUST00000104927 357 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CopeO89079 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm15016-201ENSMUST00000117300 720 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm15901-201ENSMUST00000117663 941 ntBASIC6.43□□□□□ -1.38
CopeO89079 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.43□□□□□ -1.38
CopeO89079 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CopeO89079 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm27005-201ENSMUST00000182783 921 ntBASIC6.43□□□□□ -1.38
CopeO89079 Mir8105-201ENSMUST00000184718 89 ntBASIC6.43□□□□□ -1.38
CopeO89079 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.43□□□□□ -1.38
CopeO89079 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CopeO89079 Gm43546-201ENSMUST00000196721 943 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm17824-201ENSMUST00000197690 805 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm42713-201ENSMUST00000202709 945 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.43□□□□□ -1.38
CopeO89079 Gm45136-201ENSMUST00000205793 943 ntBASIC6.43□□□□□ -1.38
CopeO89079 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.43□□□□□ -1.38
CopeO89079 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.43□□□□□ -1.38
CopeO89079 Gm18586-201ENSMUST00000217265 518 ntBASIC6.43□□□□□ -1.38
CopeO89079 AC173482.3-201ENSMUST00000225492 1212 ntBASIC6.43□□□□□ -1.38
CopeO89079 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
CopeO89079 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CopeO89079 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
CopeO89079 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.43□□□□□ -1.38
CopeO89079 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CopeO89079 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CopeO89079 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.43□□□□□ -1.38
CopeO89079 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CopeO89079 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CopeO89079 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CopeO89079 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CopeO89079 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.42□□□□□ -1.38
CopeO89079 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CopeO89079 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.42□□□□□ -1.38
CopeO89079 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CopeO89079 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CopeO89079 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.42□□□□□ -1.38
CopeO89079 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CopeO89079 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CopeO89079 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.42□□□□□ -1.38
CopeO89079 Rnu11-201ENSMUST00000104135 134 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm22103-201ENSMUST00000116733 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm26475-201ENSMUST00000116769 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm23620-201ENSMUST00000116812 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm25042-201ENSMUST00000116856 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm25540-201ENSMUST00000116880 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm12842-201ENSMUST00000117298 476 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm11920-201ENSMUST00000118491 563 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm6142-201ENSMUST00000120290 325 ntBASIC6.42□□□□□ -1.38
CopeO89079 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm8648-201ENSMUST00000122457 221 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.42□□□□□ -1.38
CopeO89079 Gm2976-201ENSMUST00000160362 513 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm23550-201ENSMUST00000179003 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm25123-201ENSMUST00000179154 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm25353-201ENSMUST00000179366 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm22992-201ENSMUST00000179496 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CopeO89079 Gm25892-201ENSMUST00000179867 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm24092-201ENSMUST00000180257 121 ntBASIC6.42□□□□□ -1.38
CopeO89079 Mir7029-201ENSMUST00000184777 61 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CopeO89079 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.42□□□□□ -1.38
CopeO89079 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CopeO89079 Gm29214-201ENSMUST00000190216 570 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm5575-201ENSMUST00000190879 398 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CopeO89079 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.42□□□□□ -1.38
CopeO89079 Gm9367-201ENSMUST00000205703 546 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm45156-201ENSMUST00000207255 439 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm19056-201ENSMUST00000218220 797 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.42□□□□□ -1.38
CopeO89079 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms