Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.12□□□□□ -1.59
Hmgb3O54879 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.12□□□□□ -1.59
Hmgb3O54879 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hmgb3O54879 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hmgb3O54879 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hmgb3O54879 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm12075-201ENSMUST00000117426 397 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm12115-201ENSMUST00000119969 447 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm11954-201ENSMUST00000121403 349 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm14612-201ENSMUST00000121522 881 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm23079-201ENSMUST00000157847 117 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm26167-201ENSMUST00000158423 253 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm17511-201ENSMUST00000172206 342 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm20432-201ENSMUST00000173716 250 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Mir6348-201ENSMUST00000183804 120 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28739-201ENSMUST00000185415 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28219-201ENSMUST00000185452 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28542-201ENSMUST00000185545 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28303-201ENSMUST00000185642 747 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29244-201ENSMUST00000185825 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29437-201ENSMUST00000185865 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29412-201ENSMUST00000185869 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28910-201ENSMUST00000185921 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28812-201ENSMUST00000185963 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29468-201ENSMUST00000185978 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28335-201ENSMUST00000186204 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28854-201ENSMUST00000186218 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28636-201ENSMUST00000186353 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28452-201ENSMUST00000186623 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29298-201ENSMUST00000186704 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28185-201ENSMUST00000186815 694 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28227-201ENSMUST00000186862 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28796-201ENSMUST00000186905 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29659-201ENSMUST00000187063 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28473-201ENSMUST00000187325 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28558-201ENSMUST00000187373 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28682-201ENSMUST00000187430 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28738-201ENSMUST00000187480 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28949-201ENSMUST00000187805 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28773-201ENSMUST00000187925 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29319-201ENSMUST00000188060 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29422-201ENSMUST00000188062 694 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28734-201ENSMUST00000188104 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28787-201ENSMUST00000188357 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29312-201ENSMUST00000188724 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29451-201ENSMUST00000188862 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29637-201ENSMUST00000188877 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29033-201ENSMUST00000189114 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29614-201ENSMUST00000189263 694 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28751-201ENSMUST00000189287 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29559-201ENSMUST00000189412 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28272-201ENSMUST00000189512 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28483-201ENSMUST00000189519 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28123-201ENSMUST00000189725 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28368-201ENSMUST00000189804 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm18849-201ENSMUST00000189861 560 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29119-201ENSMUST00000189973 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28716-201ENSMUST00000190217 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29239-201ENSMUST00000190304 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28837-201ENSMUST00000190397 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28968-201ENSMUST00000190413 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28531-201ENSMUST00000190529 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm28165-201ENSMUST00000190669 694 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm29181-201ENSMUST00000191288 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm38229-201ENSMUST00000191931 696 ntBASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC5.11□□□□□ -1.59
Hmgb3O54879 Gm32347-201ENSMUST00000192944 696 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms