Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm43089-201ENSMUST00000199162 275 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm44181-201ENSMUST00000203106 483 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 AC153557.1-201ENSMUST00000217697 403 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 AC192616.1-201ENSMUST00000221922 132 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm26063-201ENSMUST00000083378 107 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 AC164297.4-201ENSMUST00000224225 1307 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Gm16421-201ENSMUST00000117616 1557 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NpcdF8VQB8 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NpcdF8VQB8 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 AC154612.1-202ENSMUST00000224806 1725 ntBASIC8.43□□□□□ -1.06
NpcdF8VQB8 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Mir674-201ENSMUST00000102421 100 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm14712-201ENSMUST00000120195 772 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm20401-201ENSMUST00000173717 212 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm22690-201ENSMUST00000175054 110 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm37337-201ENSMUST00000192601 993 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm31520-201ENSMUST00000203048 733 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm19987-201ENSMUST00000216339 499 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 AC118230.1-201ENSMUST00000220196 656 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm19195-201ENSMUST00000222018 511 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 AC158981.3-201ENSMUST00000226844 1024 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.42□□□□□ -1.06
NpcdF8VQB8 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.42□□□□□ -1.06
NpcdF8VQB8 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm24790-201ENSMUST00000104285 132 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm15422-201ENSMUST00000117453 541 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm13835-201ENSMUST00000118459 685 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm16471-201ENSMUST00000121940 618 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm5401-201ENSMUST00000122444 365 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm24551-201ENSMUST00000158645 92 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm23968-201ENSMUST00000175047 125 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm28952-201ENSMUST00000189285 681 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm37809-201ENSMUST00000195050 931 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Mir1892-201ENSMUST00000197752 80 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm43850-201ENSMUST00000202021 578 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm18995-201ENSMUST00000202981 520 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC8.41□□□□□ -1.06
NpcdF8VQB8 Gm31861-201ENSMUST00000204563 672 ntBASIC8.41□□□□□ -1.06
NpcdF8VQB8 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms