Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 CT025686.2-201ENSMUST00000227898 3315 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Mir669o-201ENSMUST00000103898 96 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm26416-201ENSMUST00000104280 134 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm15332-201ENSMUST00000118386 357 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm14358-201ENSMUST00000118458 403 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm6472-201ENSMUST00000178147 651 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Mir6377-201ENSMUST00000183760 114 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm18727-201ENSMUST00000185981 553 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm37343-201ENSMUST00000192542 111 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm18040-201ENSMUST00000217922 827 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 AC154558.1-201ENSMUST00000222278 415 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm7842-201ENSMUST00000217691 1379 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm44423-201ENSMUST00000203746 3158 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm20775-201ENSMUST00000100115 1851 ntBASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Phka2-201ENSMUST00000033652 4133 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Hmcn1D3YXG0 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm13750-201ENSMUST00000117621 465 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm11848-201ENSMUST00000121207 973 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm14038-201ENSMUST00000121500 807 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm6977-201ENSMUST00000121568 512 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm15096-201ENSMUST00000121918 878 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm15501-202ENSMUST00000140687 625 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm23546-201ENSMUST00000158211 137 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm5261-201ENSMUST00000185860 713 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm37932-201ENSMUST00000192258 1167 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm43992-201ENSMUST00000204358 197 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm44754-201ENSMUST00000208155 400 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm45432-201ENSMUST00000210391 416 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm45343-201ENSMUST00000210452 828 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hmcn1D3YXG0 Gm9202-201ENSMUST00000223036 437 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms