Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm5341-201ENSMUST00000058881 489 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm14512-201ENSMUST00000117924 230 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm4911-201ENSMUST00000119388 945 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm11481-201ENSMUST00000120069 255 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm27409-201ENSMUST00000184727 80 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm37103-201ENSMUST00000191830 115 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm29745-201ENSMUST00000198005 687 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm23330-201ENSMUST00000082660 164 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Gm232-201ENSMUST00000216549 2559 ntBASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col4a6B1AVK5 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm44178-201ENSMUST00000205229 2930 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm12077-201ENSMUST00000117049 364 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm6808-201ENSMUST00000162341 807 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm3605-201ENSMUST00000185858 440 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm17988-201ENSMUST00000208796 535 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.53□□□□□ -1.36
Col4a6B1AVK5 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms