Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm15715-201ENSMUST00000118032 283 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm13237-201ENSMUST00000122151 635 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm24383-201ENSMUST00000122691 333 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm27601-201ENSMUST00000184794 127 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm43762-201ENSMUST00000201521 295 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Smc1aQ9CU62 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm21955-201ENSMUST00000194137 4968 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm23748-201ENSMUST00000104227 131 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm23810-201ENSMUST00000175150 74 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm44370-201ENSMUST00000175436 112 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Mir6337-201ENSMUST00000184194 105 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm28586-201ENSMUST00000189857 456 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm44984-201ENSMUST00000207802 394 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm5928-201ENSMUST00000221839 466 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm6990-201ENSMUST00000086830 348 ntBASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Smc1aQ9CU62 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms