Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm17791-201ENSMUST00000185660 1501 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm22470-201ENSMUST00000104117 130 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm12944-201ENSMUST00000119262 463 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm11257-201ENSMUST00000121313 315 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm22895-201ENSMUST00000157508 308 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm24782-201ENSMUST00000157641 132 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm16026-205ENSMUST00000162923 641 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm27864-201ENSMUST00000183704 190 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Mir6357-201ENSMUST00000184246 104 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm29492-201ENSMUST00000187124 457 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm38231-201ENSMUST00000192030 347 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm36935-201ENSMUST00000192526 292 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm38261-201ENSMUST00000192608 316 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm8101-201ENSMUST00000192796 478 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm3103-201ENSMUST00000198073 752 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm44432-201ENSMUST00000203342 938 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm45247-201ENSMUST00000210757 309 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 AC164116.1-201ENSMUST00000225810 622 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim11Q99PQ2 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm24986-201ENSMUST00000104452 132 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm15125-201ENSMUST00000116185 800 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm13454-201ENSMUST00000118166 483 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm15484-201ENSMUST00000118871 828 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm11371-201ENSMUST00000120294 385 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm7212-201ENSMUST00000120817 348 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm3102-201ENSMUST00000164236 489 ntBASIC8.07□□□□□ -1.12
Trim11Q99PQ2 Gm17064-201ENSMUST00000167690 452 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms