Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm15349-201ENSMUST00000121154 204 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm23077-201ENSMUST00000157854 116 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm25556-201ENSMUST00000158077 144 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm44411-201ENSMUST00000204172 349 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm32983-201ENSMUST00000208500 505 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gm18601-201ENSMUST00000220831 634 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Cdk5rap3Q99LM2 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Robo2-210ENSMUST00000226478 8059 ntBASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Cdk5rap3Q99LM2 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm24888-201ENSMUST00000104387 130 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm11553-201ENSMUST00000120682 240 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm12094-201ENSMUST00000121781 472 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm27156-201ENSMUST00000184589 754 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm37376-201ENSMUST00000192176 453 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm18012-201ENSMUST00000204558 773 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm6575-201ENSMUST00000222946 697 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Mir106b-201ENSMUST00000083580 82 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdk5rap3Q99LM2 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdk5rap3Q99LM2 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdk5rap3Q99LM2 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms