Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.71□□□□□ -1.5
Ebf4Q8K4J2 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm22781-201ENSMUST00000104083 137 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm13463-201ENSMUST00000119020 233 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm12331-201ENSMUST00000119927 622 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm3760-201ENSMUST00000167475 804 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm17786-201ENSMUST00000182000 427 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm38373-201ENSMUST00000192042 288 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm7832-201ENSMUST00000202613 880 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm31663-202ENSMUST00000208481 1190 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm7557-201ENSMUST00000221935 865 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gcnt2-204ENSMUST00000223570 335 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Diaph3-204ENSMUST00000226254 682 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm6166-201ENSMUST00000098689 409 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.7□□□□□ -1.5
Ebf4Q8K4J2 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm26016-201ENSMUST00000104403 129 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm10936-201ENSMUST00000105264 252 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm14998-201ENSMUST00000120502 495 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm27596-201ENSMUST00000185061 83 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm29369-201ENSMUST00000190674 615 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm37871-201ENSMUST00000194973 688 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm26413-201ENSMUST00000196783 126 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm43147-201ENSMUST00000196944 542 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm45008-201ENSMUST00000206420 493 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ebf4Q8K4J2 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms