Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm45117-201ENSMUST00000207250 1774 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Usp47Q8BY87 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.96□□□□□ -0.97
Usp47Q8BY87 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Usp47Q8BY87 Gm42544-201ENSMUST00000197868 3242 ntBASIC8.96□□□□□ -0.97
Usp47Q8BY87 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
Usp47Q8BY87 Gm38085-201ENSMUST00000195785 3062 ntBASIC8.96□□□□□ -0.97
Usp47Q8BY87 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Usp47Q8BY87 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.96□□□□□ -0.97
Usp47Q8BY87 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm22371-201ENSMUST00000104588 130 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC8.96□□□□□ -0.98
Usp47Q8BY87 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm23896-201ENSMUST00000158109 130 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm3351-201ENSMUST00000193454 505 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Usp47Q8BY87 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.96□□□□□ -0.98
Usp47Q8BY87 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Usp47Q8BY87 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.96□□□□□ -0.98
Usp47Q8BY87 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm14580-201ENSMUST00000119122 718 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm12396-201ENSMUST00000121600 306 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm17366-201ENSMUST00000167629 187 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm27653-201ENSMUST00000185037 136 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp47Q8BY87 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm2996-201ENSMUST00000211398 537 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm18628-201ENSMUST00000220584 475 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 AC211878.1-201ENSMUST00000221668 474 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm33312-201ENSMUST00000222443 332 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm44215-201ENSMUST00000204910 2711 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.95□□□□□ -0.98
Usp47Q8BY87 Gm43637-201ENSMUST00000202206 2926 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm11821-201ENSMUST00000117335 979 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm9005-201ENSMUST00000119908 607 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm16164-201ENSMUST00000160078 468 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm23945-201ENSMUST00000179609 92 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 Mir6973b-201ENSMUST00000184185 80 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm29650-201ENSMUST00000188485 742 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm37463-201ENSMUST00000193819 796 ntBASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp47Q8BY87 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp47Q8BY87 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm43190-201ENSMUST00000187850 1779 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 AC166358.5-201ENSMUST00000220706 1302 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm25387-201ENSMUST00000157813 132 ntBASIC8.93□□□□□ -0.98
Usp47Q8BY87 Gm15257-201ENSMUST00000177680 883 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms