Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm13735-201ENSMUST00000120217 670 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm24157-201ENSMUST00000175265 111 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm20691-201ENSMUST00000176889 333 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm27866-201ENSMUST00000184459 171 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm7867-201ENSMUST00000189856 546 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm4585-201ENSMUST00000207218 452 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm44984-201ENSMUST00000207802 394 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm18226-201ENSMUST00000215261 521 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm5321-201ENSMUST00000072050 447 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm6887-201ENSMUST00000080945 482 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.79□□□□□ -1.32
Ccdc40Q8BI79 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Mir674-201ENSMUST00000102421 100 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm12468-201ENSMUST00000116189 404 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm11501-201ENSMUST00000118039 581 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm6142-201ENSMUST00000120290 325 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm26587-201ENSMUST00000180795 989 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm29383-201ENSMUST00000188284 480 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm29496-201ENSMUST00000189854 693 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm34144-201ENSMUST00000197039 259 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc40Q8BI79 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Ccdc40Q8BI79 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.77□□□□□ -1.32
Ccdc40Q8BI79 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.77□□□□□ -1.32
Ccdc40Q8BI79 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.77□□□□□ -1.32
Ccdc40Q8BI79 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Ccdc40Q8BI79 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Ccdc40Q8BI79 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc40Q8BI79 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms