Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm22675-201ENSMUST00000158430 104 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC6.18□□□□□ -1.42
Foxc1Q61572 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm25525-201ENSMUST00000177701 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm26178-201ENSMUST00000177706 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm26465-201ENSMUST00000178517 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm24317-201ENSMUST00000178536 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm25021-201ENSMUST00000179184 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm22995-201ENSMUST00000179670 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm24424-201ENSMUST00000179714 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm24389-201ENSMUST00000179962 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm25672-201ENSMUST00000180111 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm6931-202ENSMUST00000183137 1009 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm29163-201ENSMUST00000188029 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm28151-201ENSMUST00000189404 951 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Scgb2b10-201ENSMUST00000191403 318 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm5256-201ENSMUST00000191412 877 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm35106-201ENSMUST00000192731 250 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm43840-201ENSMUST00000199444 484 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm44306-201ENSMUST00000203058 203 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm44060-201ENSMUST00000204440 410 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm5609-201ENSMUST00000210008 1267 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm9689-201ENSMUST00000210009 428 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm7151-201ENSMUST00000211511 954 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm20734-201ENSMUST00000216939 193 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm4739-201ENSMUST00000218296 633 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 AC174082.1-201ENSMUST00000221106 307 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 AC163038.3-201ENSMUST00000223945 558 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Ear14-201ENSMUST00000049559 468 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Snora65-201ENSMUST00000083190 130 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm23815-201ENSMUST00000083231 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm23851-201ENSMUST00000083831 103 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm23520-201ENSMUST00000093736 107 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Pkib-201ENSMUST00000066028 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Pou2f1-201ENSMUST00000027850 2258 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Fshb-201ENSMUST00000028533 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Klf10-201ENSMUST00000074043 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC6.17□□□□□ -1.42
Foxc1Q61572 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Gabpb2-203ENSMUST00000107204 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Foxc1Q61572 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Foxc1Q61572 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms