Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm23810-201ENSMUST00000175150 74 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC6.31□□□□□ -1.4
ClpbQ60649 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm43459-201ENSMUST00000202093 331 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm17834-201ENSMUST00000204322 891 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.31□□□□□ -1.4
ClpbQ60649 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ClpbQ60649 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ClpbQ60649 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.31□□□□□ -1.4
ClpbQ60649 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
ClpbQ60649 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ClpbQ60649 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
ClpbQ60649 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ClpbQ60649 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm23768-201ENSMUST00000104440 131 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm6654-201ENSMUST00000118950 348 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm23082-201ENSMUST00000157852 133 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm25435-201ENSMUST00000158277 267 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm27152-201ENSMUST00000183828 99 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm29747-201ENSMUST00000194764 585 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm43689-201ENSMUST00000195951 427 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm44412-201ENSMUST00000203018 294 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.3□□□□□ -1.4
ClpbQ60649 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ClpbQ60649 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Mir425-201ENSMUST00000083645 85 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ClpbQ60649 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.3□□□□□ -1.4
ClpbQ60649 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ClpbQ60649 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ClpbQ60649 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.3□□□□□ -1.4
ClpbQ60649 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
ClpbQ60649 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ClpbQ60649 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
ClpbQ60649 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ClpbQ60649 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm26079-201ENSMUST00000104066 133 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.29□□□□□ -1.4
ClpbQ60649 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm12189-201ENSMUST00000119779 912 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms