Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm14871-201ENSMUST00000119056 194 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm28567-201ENSMUST00000190270 693 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm37044-201ENSMUST00000193531 693 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm38369-201ENSMUST00000195101 693 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm44471-201ENSMUST00000197963 100 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm7890-201ENSMUST00000204877 601 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm18469-201ENSMUST00000208850 439 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm13679-201ENSMUST00000118678 484 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm23894-201ENSMUST00000158107 313 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm24303-201ENSMUST00000178237 126 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm28385-201ENSMUST00000185671 292 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm43946-201ENSMUST00000204058 886 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm17997-201ENSMUST00000211801 840 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm6863-201ENSMUST00000052882 636 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 AC164978.1-201ENSMUST00000228608 4011 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm45250-201ENSMUST00000209414 3592 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC5.97□□□□□ -1.45
Spg11Q3UHA3 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Gm13473-201ENSMUST00000119289 367 ntBASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Gm13738-201ENSMUST00000122437 469 ntBASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Gm23757-201ENSMUST00000158353 100 ntBASIC5.96□□□□□ -1.45
Spg11Q3UHA3 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.96□□□□□ -1.45
Spg11Q3UHA3 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 AC138284.1-201ENSMUST00000214258 3236 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gm26079-201ENSMUST00000104066 133 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gm26078-201ENSMUST00000104067 128 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gm6744-201ENSMUST00000119303 543 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Mir1963-201ENSMUST00000158594 59 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gm20368-201ENSMUST00000220716 301 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Zfp429-203ENSMUST00000224684 524 ntBASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Spg11Q3UHA3 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms