Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm21920-201ENSMUST00000190042 695 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm37708-201ENSMUST00000192337 895 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm4525-201ENSMUST00000198831 254 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm42883-201ENSMUST00000202594 222 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm2221-201ENSMUST00000209342 418 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp39Q3TIX9 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Usp39Q3TIX9 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Usp39Q3TIX9 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm22774-201ENSMUST00000102084 109 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm26417-201ENSMUST00000104274 135 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm25877-201ENSMUST00000104326 129 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm14388-201ENSMUST00000118119 477 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm6382-201ENSMUST00000118873 942 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm9439-201ENSMUST00000119554 973 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm11796-201ENSMUST00000120208 972 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm8051-201ENSMUST00000120464 466 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm12630-201ENSMUST00000121575 784 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm11834-201ENSMUST00000122257 585 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm26353-201ENSMUST00000158224 255 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm24157-201ENSMUST00000175265 111 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm37241-201ENSMUST00000191736 523 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm36448-201ENSMUST00000199916 438 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm8275-201ENSMUST00000219732 424 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Gm40598-201ENSMUST00000222953 547 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 AC153646.1-201ENSMUST00000223229 1279 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.52□□□□□ -1.37
Usp39Q3TIX9 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms