Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm12874-201ENSMUST00000117190 913 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm15176-201ENSMUST00000117734 135 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm11902-201ENSMUST00000118849 270 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm13430-201ENSMUST00000121366 288 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm24435-201ENSMUST00000157886 110 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm26000-201ENSMUST00000157991 107 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm24768-201ENSMUST00000158512 94 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm24343-201ENSMUST00000158708 111 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col8a1Q00780 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm26528-201ENSMUST00000181965 283 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm6445-201ENSMUST00000189515 1112 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm38122-201ENSMUST00000192679 885 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm44411-201ENSMUST00000204172 349 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.14□□□□□ -1.43
Col8a1Q00780 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm5374-202ENSMUST00000222910 314 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col8a1Q00780 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm6990-201ENSMUST00000086830 348 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm24519-201ENSMUST00000104507 132 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm11271-201ENSMUST00000116054 440 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm14607-201ENSMUST00000119119 491 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm5166-201ENSMUST00000121332 573 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm14369-201ENSMUST00000121355 285 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm12778-201ENSMUST00000122341 333 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm12833-201ENSMUST00000136112 477 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Ear-ps10-201ENSMUST00000161871 460 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm26194-201ENSMUST00000175036 71 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col8a1Q00780 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm29144-201ENSMUST00000189235 339 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm29238-201ENSMUST00000189709 695 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm7867-201ENSMUST00000189856 546 ntBASIC6.13□□□□□ -1.43
Col8a1Q00780 Gm28607-201ENSMUST00000190142 339 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms