Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.9□□□□□ -1.46
Cdh11P55288 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdh11P55288 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdh11P55288 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdh11P55288 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdh11P55288 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdh11P55288 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdh11P55288 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.9□□□□□ -1.47
Cdh11P55288 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.9□□□□□ -1.47
Cdh11P55288 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdh11P55288 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.9□□□□□ -1.47
Cdh11P55288 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.9□□□□□ -1.47
Cdh11P55288 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdh11P55288 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Cdh11P55288 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cdh11P55288 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm13333-201ENSMUST00000119424 781 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm12654-201ENSMUST00000120387 587 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm14741-201ENSMUST00000120777 1009 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm12540-201ENSMUST00000121938 319 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm9285-201ENSMUST00000177691 697 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm29470-201ENSMUST00000188007 696 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm29141-201ENSMUST00000190357 882 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm5711-201ENSMUST00000197896 421 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm45122-201ENSMUST00000206376 784 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm18871-201ENSMUST00000218655 745 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 AC150661.1-201ENSMUST00000222563 495 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 CT009495.1-201ENSMUST00000224221 862 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 AC123917.1-201ENSMUST00000228063 1048 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdh11P55288 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.89□□□□□ -1.47
Cdh11P55288 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdh11P55288 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Cdh11P55288 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdh11P55288 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm12573-201ENSMUST00000118158 286 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm12242-201ENSMUST00000118824 738 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm6654-201ENSMUST00000118950 348 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm14587-201ENSMUST00000121714 658 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm12094-201ENSMUST00000121781 472 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdh11P55288 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm24812-201ENSMUST00000175315 284 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm28918-201ENSMUST00000188822 699 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm5244-202ENSMUST00000189517 743 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm42708-201ENSMUST00000196332 905 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm7452-201ENSMUST00000200764 788 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm17918-201ENSMUST00000205315 574 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdh11P55288 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 Gm18914-201ENSMUST00000214625 616 ntBASIC5.88□□□□□ -1.47
Cdh11P55288 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms