Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.37□□□□□ -1.39
Fdft1P53798 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.37□□□□□ -1.39
Fdft1P53798 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Fdft1P53798 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Fdft1P53798 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.37□□□□□ -1.39
Fdft1P53798 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.37□□□□□ -1.39
Fdft1P53798 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Fdft1P53798 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Fdft1P53798 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Fdft1P53798 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Fdft1P53798 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.37□□□□□ -1.39
Fdft1P53798 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Fdft1P53798 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Fdft1P53798 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.36□□□□□ -1.39
Fdft1P53798 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Gm23888-201ENSMUST00000122690 253 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm6081-201ENSMUST00000134472 489 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm22915-201ENSMUST00000157615 136 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Gm22094-201ENSMUST00000158976 117 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Fdft1P53798 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.36□□□□□ -1.39
Fdft1P53798 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.36□□□□□ -1.39
Fdft1P53798 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm8190-201ENSMUST00000199603 586 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Gm7452-201ENSMUST00000200764 788 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Gm7780-201ENSMUST00000214787 406 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm33312-201ENSMUST00000222443 332 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm9788-201ENSMUST00000057038 906 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Fdft1P53798 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.36□□□□□ -1.39
Fdft1P53798 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Fdft1P53798 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Fdft1P53798 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.36□□□□□ -1.39
Fdft1P53798 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Fdft1P53798 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Fdft1P53798 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Fdft1P53798 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
Fdft1P53798 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.35□□□□□ -1.39
Fdft1P53798 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm24790-201ENSMUST00000104285 132 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm7821-201ENSMUST00000117111 788 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm5387-201ENSMUST00000119776 857 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm12152-201ENSMUST00000122465 684 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.35□□□□□ -1.39
Fdft1P53798 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm10136-201ENSMUST00000183196 435 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm18447-201ENSMUST00000187501 307 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.35□□□□□ -1.39
Fdft1P53798 Gm44252-201ENSMUST00000204187 330 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Gm2225-201ENSMUST00000209570 377 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.35□□□□□ -1.39
Fdft1P53798 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Fdft1P53798 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms