Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm22932-201ENSMUST00000175510 72 ntBASIC9.75□□□□□ -0.85
Cux1P53564 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC9.75□□□□□ -0.85
Cux1P53564 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cux1P53564 Gm22300-201ENSMUST00000082661 126 ntBASIC9.75□□□□□ -0.85
Cux1P53564 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cux1P53564 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cux1P53564 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cux1P53564 AC158537.1-201ENSMUST00000224637 1711 ntBASIC9.75□□□□□ -0.85
Cux1P53564 Gm45457-201ENSMUST00000209931 3089 ntBASIC9.74□□□□□ -0.85
Cux1P53564 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Cux1P53564 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.74□□□□□ -0.85
Cux1P53564 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cux1P53564 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Cux1P53564 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Cux1P53564 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC9.74□□□□□ -0.85
Cux1P53564 Mir5125-201ENSMUST00000175240 79 ntBASIC9.74□□□□□ -0.85
Cux1P53564 Gm37103-201ENSMUST00000191830 115 ntBASIC9.74□□□□□ -0.85
Cux1P53564 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC9.74□□□□□ -0.85
Cux1P53564 Gm18409-202ENSMUST00000220105 529 ntBASIC9.74□□□□□ -0.85
Cux1P53564 AC165260.1-201ENSMUST00000224127 683 ntBASIC9.74□□□□□ -0.85
Cux1P53564 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Cux1P53564 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.74□□□□□ -0.85
Cux1P53564 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Cux1P53564 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cux1P53564 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Gm15048-201ENSMUST00000118201 954 ntBASIC9.73□□□□□ -0.85
Cux1P53564 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC9.73□□□□□ -0.85
Cux1P53564 Gm24081-201ENSMUST00000175177 125 ntBASIC9.73□□□□□ -0.85
Cux1P53564 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC9.73□□□□□ -0.85
Cux1P53564 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Cux1P53564 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC9.73□□□□□ -0.85
Cux1P53564 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 AC163664.2-201ENSMUST00000228894 459 ntBASIC9.73□□□□□ -0.85
Cux1P53564 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Cux1P53564 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC9.73□□□□□ -0.85
Cux1P53564 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cux1P53564 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC9.73□□□□□ -0.85
Cux1P53564 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Cux1P53564 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cux1P53564 Gm11984-201ENSMUST00000118142 766 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC9.72□□□□□ -0.85
Cux1P53564 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC9.72□□□□□ -0.85
Cux1P53564 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC9.72□□□□□ -0.85
Cux1P53564 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Cux1P53564 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC9.72□□□□□ -0.85
Cux1P53564 Gm45196-201ENSMUST00000206751 825 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cux1P53564 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC9.72□□□□□ -0.85
Cux1P53564 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Cux1P53564 Gm15011-201ENSMUST00000117724 1480 ntBASIC9.72□□□□□ -0.85
Cux1P53564 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cux1P53564 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Gm10258-201ENSMUST00000091270 2123 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cux1P53564 Gm13818-201ENSMUST00000119441 511 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Gm14331-201ENSMUST00000120396 409 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Mup-ps28-201ENSMUST00000120686 289 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Gm24741-201ENSMUST00000158857 106 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Gm6611-201ENSMUST00000163830 1272 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC9.72□□□□□ -0.85
Cux1P53564 Gm29745-201ENSMUST00000198005 687 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms