Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.08□□□□□ -1.44
Tnfsf4P43488 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Tnfsf4P43488 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Tnfsf4P43488 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Tnfsf4P43488 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Mir688-201ENSMUST00000102055 75 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm14156-201ENSMUST00000121538 483 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm23756-201ENSMUST00000157582 114 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm28114-201ENSMUST00000187232 379 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm29383-201ENSMUST00000188284 480 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm19092-201ENSMUST00000209036 969 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Mir425-201ENSMUST00000083645 85 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.07□□□□□ -1.44
Tnfsf4P43488 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Tnfsf4P43488 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm24790-201ENSMUST00000104285 132 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm12573-201ENSMUST00000118158 286 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm13455-201ENSMUST00000118767 517 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm15750-201ENSMUST00000120970 616 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm15586-201ENSMUST00000121218 528 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm8648-201ENSMUST00000122457 221 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm23426-201ENSMUST00000122483 318 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm23968-201ENSMUST00000175047 125 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm5283-201ENSMUST00000177874 334 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm43576-201ENSMUST00000197937 871 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm8190-201ENSMUST00000199603 586 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm43459-201ENSMUST00000202093 331 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm8290-201ENSMUST00000218202 477 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm33312-201ENSMUST00000222443 332 ntBASIC6.06□□□□□ -1.44
Tnfsf4P43488 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Tnfsf4P43488 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms