Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.58□□□□□ -1.2
Traf1P39428 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.57□□□□□ -1.2
Traf1P39428 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.57□□□□□ -1.2
Traf1P39428 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.57□□□□□ -1.2
Traf1P39428 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Traf1P39428 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
Traf1P39428 Gm15181-201ENSMUST00000120142 177 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm12140-201ENSMUST00000121214 544 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm5809-201ENSMUST00000121854 529 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm12438-201ENSMUST00000122034 336 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
Traf1P39428 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.57□□□□□ -1.2
Traf1P39428 Gm27970-201ENSMUST00000184854 407 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Gm37493-201ENSMUST00000193167 433 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.57□□□□□ -1.2
Traf1P39428 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.57□□□□□ -1.2
Traf1P39428 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Traf1P39428 Gm6990-201ENSMUST00000086830 348 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm10205-201ENSMUST00000087431 234 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Traf1P39428 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Traf1P39428 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Traf1P39428 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.57□□□□□ -1.2
Traf1P39428 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Traf1P39428 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.57□□□□□ -1.2
Traf1P39428 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Traf1P39428 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm26079-201ENSMUST00000104066 133 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.56□□□□□ -1.2
Traf1P39428 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.56□□□□□ -1.2
Traf1P39428 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.56□□□□□ -1.2
Traf1P39428 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm10410-201ENSMUST00000180138 384 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Gm26898-201ENSMUST00000181678 384 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Gm18700-201ENSMUST00000185791 553 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Gm28665-201ENSMUST00000189269 670 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm37380-201ENSMUST00000193752 397 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Gm18600-201ENSMUST00000207205 505 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm22581-201ENSMUST00000083735 136 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
Traf1P39428 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Traf1P39428 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Traf1P39428 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Traf1P39428 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.56□□□□□ -1.2
Traf1P39428 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.55□□□□□ -1.2
Traf1P39428 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.55□□□□□ -1.2
Traf1P39428 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.55□□□□□ -1.2
Traf1P39428 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.55□□□□□ -1.2
Traf1P39428 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Traf1P39428 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Traf1P39428 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 209.2 ms