Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm15216-201ENSMUST00000118058 277 ntBASIC5.7□□□□□ -1.5
P20040 Gm12447-201ENSMUST00000119110 470 ntBASIC5.7□□□□□ -1.5
P20040 Gm13642-201ENSMUST00000121697 381 ntBASIC5.7□□□□□ -1.5
P20040 Gm26023-201ENSMUST00000122722 313 ntBASIC5.7□□□□□ -1.5
P20040 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Gm6081-201ENSMUST00000134472 489 ntBASIC5.7□□□□□ -1.5
P20040 Gm22235-201ENSMUST00000157085 110 ntBASIC5.7□□□□□ -1.5
P20040 Gm23756-201ENSMUST00000157582 114 ntBASIC5.7□□□□□ -1.5
P20040 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
P20040 Gm20615-201ENSMUST00000177503 705 ntBASIC5.7□□□□□ -1.5
P20040 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
P20040 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.7□□□□□ -1.5
P20040 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.7□□□□□ -1.5
P20040 Gm43459-201ENSMUST00000202093 331 ntBASIC5.7□□□□□ -1.5
P20040 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.7□□□□□ -1.5
P20040 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.7□□□□□ -1.5
P20040 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.7□□□□□ -1.5
P20040 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.7□□□□□ -1.5
P20040 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
P20040 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.7□□□□□ -1.5
P20040 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.7□□□□□ -1.5
P20040 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
P20040 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
P20040 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.69□□□□□ -1.5
P20040 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.69□□□□□ -1.5
P20040 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
P20040 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
P20040 Mir674-201ENSMUST00000102421 100 ntBASIC5.69□□□□□ -1.5
P20040 Gm26079-201ENSMUST00000104066 133 ntBASIC5.69□□□□□ -1.5
P20040 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
P20040 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.69□□□□□ -1.5
P20040 Gm14613-201ENSMUST00000122239 752 ntBASIC5.69□□□□□ -1.5
P20040 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.69□□□□□ -1.5
P20040 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.69□□□□□ -1.5
P20040 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
P20040 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
P20040 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Gm4202-201ENSMUST00000169025 733 ntBASIC5.69□□□□□ -1.5
P20040 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.69□□□□□ -1.5
P20040 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Gm44243-201ENSMUST00000204323 692 ntBASIC5.69□□□□□ -1.5
P20040 Gm45122-201ENSMUST00000206376 784 ntBASIC5.69□□□□□ -1.5
P20040 Gm4548-201ENSMUST00000208487 509 ntBASIC5.69□□□□□ -1.5
P20040 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.69□□□□□ -1.5
P20040 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.69□□□□□ -1.5
P20040 Gm18914-201ENSMUST00000214625 616 ntBASIC5.69□□□□□ -1.5
P20040 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Gm9267-201ENSMUST00000222831 404 ntBASIC5.69□□□□□ -1.5
P20040 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.69□□□□□ -1.5
P20040 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.69□□□□□ -1.5
P20040 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.69□□□□□ -1.5
P20040 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.69□□□□□ -1.5
P20040 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
P20040 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.69□□□□□ -1.5
P20040 Gm10108-201ENSMUST00000078246 319 ntBASIC5.69□□□□□ -1.5
P20040 Mir425-201ENSMUST00000083645 85 ntBASIC5.69□□□□□ -1.5
P20040 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
P20040 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
P20040 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.69□□□□□ -1.5
P20040 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
P20040 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
P20040 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
P20040 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
P20040 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.69□□□□□ -1.5
P20040 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.68□□□□□ -1.5
P20040 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
P20040 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.68□□□□□ -1.5
P20040 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
P20040 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
P20040 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.68□□□□□ -1.5
P20040 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.68□□□□□ -1.5
P20040 Gm12939-201ENSMUST00000117303 165 ntBASIC5.68□□□□□ -1.5
P20040 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms