Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm12929-201ENSMUST00000122406 370 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm23426-201ENSMUST00000122483 318 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm11107-201ENSMUST00000165414 505 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm37380-201ENSMUST00000193752 397 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm5853-201ENSMUST00000197183 632 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm43157-201ENSMUST00000198223 412 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm42799-201ENSMUST00000201331 328 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm44984-201ENSMUST00000207802 394 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm12101-201ENSMUST00000121590 390 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Mir1953-201ENSMUST00000157866 89 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm24155-201ENSMUST00000175259 110 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm27970-201ENSMUST00000184854 407 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm43929-201ENSMUST00000203025 409 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm45514-201ENSMUST00000211531 689 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm18618-201ENSMUST00000222211 473 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp6P0C0A3 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Chmp6P0C0A3 Gm26422-201ENSMUST00000104276 132 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms