Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm22714-201ENSMUST00000116894 78 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm4911-201ENSMUST00000119388 945 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Mir6992-201ENSMUST00000183342 109 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm37265-201ENSMUST00000191698 885 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm9237-201ENSMUST00000221499 548 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm10095-201ENSMUST00000222765 483 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm12618-201ENSMUST00000121754 483 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm26455-201ENSMUST00000175300 92 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm27854-201ENSMUST00000175578 244 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm44382-201ENSMUST00000198683 122 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm43116-201ENSMUST00000199789 195 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28392-201ENSMUST00000077630 393 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm24741-201ENSMUST00000158857 106 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm6541-201ENSMUST00000165542 561 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm19560-201ENSMUST00000177510 514 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm24303-201ENSMUST00000178237 126 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm33178-201ENSMUST00000212090 257 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 AC154595.2-201ENSMUST00000225067 310 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Scn3aA2ASI5 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms