Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Gm715-201ENSMUST00000117865 831 ntBASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Tgds-204ENSMUST00000228543 1594 ntBASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom3Q9QXN0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
Shroom3Q9QXN0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom3Q9QXN0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Gm12896-201ENSMUST00000118430 226 ntBASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom3Q9QXN0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom3Q9QXN0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shroom3Q9QXN0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Shroom3Q9QXN0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom3Q9QXN0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shroom3Q9QXN0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms