Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rbfox1Q9JJ43 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Gm9988-201ENSMUST00000069786 435 ntBASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rbfox1Q9JJ43 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rbfox1Q9JJ43 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Gm13234-201ENSMUST00000120010 747 ntBASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Gm22325-201ENSMUST00000158904 308 ntBASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rbfox1Q9JJ43 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Reep4-203ENSMUST00000226563 1444 ntBASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rbfox1Q9JJ43 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Rbfox1Q9JJ43 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rbfox1Q9JJ43 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms