Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps35Q9EQH3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps35Q9EQH3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vps35Q9EQH3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps35Q9EQH3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Gm12441-201ENSMUST00000121806 588 ntBASIC18.09■□□□□ 0.49
Vps35Q9EQH3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps35Q9EQH3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps35Q9EQH3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps35Q9EQH3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Vps35Q9EQH3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Vps35Q9EQH3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps35Q9EQH3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.07■□□□□ 0.48
Vps35Q9EQH3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms