Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Mir5133-201ENSMUST00000174955 77 ntBASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a3bpQ9EQG9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a3bpQ9EQG9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.74■□□□□ 0.91
Col4a3bpQ9EQG9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3bpQ9EQG9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3bpQ9EQG9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
Col4a3bpQ9EQG9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.73■□□□□ 0.91
Col4a3bpQ9EQG9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3bpQ9EQG9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.73■□□□□ 0.91
Col4a3bpQ9EQG9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a3bpQ9EQG9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a3bpQ9EQG9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Gm6365-201ENSMUST00000054711 744 ntBASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a3bpQ9EQG9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a3bpQ9EQG9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a3bpQ9EQG9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Gm7290-201ENSMUST00000104990 617 ntBASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Gm12918-201ENSMUST00000120234 636 ntBASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Gm15710-201ENSMUST00000121821 636 ntBASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Gm5075-201ENSMUST00000196916 622 ntBASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a3bpQ9EQG9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms