Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c6Q9D8P7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c6Q9D8P7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c6Q9D8P7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c6Q9D8P7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c6Q9D8P7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c6Q9D8P7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf3c6Q9D8P7 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf3c6Q9D8P7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf3c6Q9D8P7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Gm7291-201ENSMUST00000199147 382 ntBASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gtf3c6Q9D8P7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gtf3c6Q9D8P7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3c6Q9D8P7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3c6Q9D8P7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3c6Q9D8P7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3c6Q9D8P7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gtf3c6Q9D8P7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gtf3c6Q9D8P7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gtf3c6Q9D8P7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gtf3c6Q9D8P7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gtf3c6Q9D8P7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Gtf3c6Q9D8P7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gtf3c6Q9D8P7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gtf3c6Q9D8P7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Gm10710-201ENSMUST00000047876 3971 ntBASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gtf3c6Q9D8P7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms