Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trim13Q9CYB0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim13Q9CYB0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trim13Q9CYB0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Trim13Q9CYB0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim13Q9CYB0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim13Q9CYB0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Gm12251-201ENSMUST00000117893 792 ntBASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.76■□□□□ 0.27
Trim13Q9CYB0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim13Q9CYB0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.75■□□□□ 0.27
Trim13Q9CYB0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim13Q9CYB0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim13Q9CYB0 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim13Q9CYB0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim13Q9CYB0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms