Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrrc40Q9CRC8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrrc40Q9CRC8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lrrc40Q9CRC8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lrrc40Q9CRC8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrrc40Q9CRC8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrrc40Q9CRC8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lrrc40Q9CRC8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrrc40Q9CRC8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lrrc40Q9CRC8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lrrc40Q9CRC8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lrrc40Q9CRC8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lrrc40Q9CRC8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrrc40Q9CRC8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Fst-202ENSMUST00000223640 2612 ntBASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lrrc40Q9CRC8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Gm10849-201ENSMUST00000100397 618 ntBASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrrc40Q9CRC8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrrc40Q9CRC8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Lrrc40Q9CRC8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Lrrc40Q9CRC8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms