Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lsm7Q9CQQ8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.33■□□□□ 0.52
Lsm7Q9CQQ8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm7Q9CQQ8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.33■□□□□ 0.52
Lsm7Q9CQQ8 Gm38285-201ENSMUST00000192928 922 ntBASIC18.33■□□□□ 0.52
Lsm7Q9CQQ8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.33■□□□□ 0.52
Lsm7Q9CQQ8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.33■□□□□ 0.52
Lsm7Q9CQQ8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm7Q9CQQ8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.32■□□□□ 0.52
Lsm7Q9CQQ8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Notumos-201ENSMUST00000151998 2659 ntBASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm7Q9CQQ8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Gm10698-201ENSMUST00000182663 604 ntBASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Gm10138-203ENSMUST00000206952 366 ntBASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Mtag2-201ENSMUST00000058665 714 ntBASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm7Q9CQQ8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Gm10252-201ENSMUST00000209541 832 ntBASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm7Q9CQQ8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm7Q9CQQ8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms